Integration: Biological Data Sharing and Integration

Vakbeschrijving Integration: Biological Data Sharing and Integration
Collegejaar: 2017-2018
Studiegidsnummer: 4032IBIB3
Docent(en):
  • dr. E. M. Bakker
Voertaal: Nederlands
Blackboard: Onbekend
EC: 3.0
Niveau: 300
Periode:
  • Geen Keuzevak
  • Geen Contractonderwijs
  • Geen Exchange
  • Geen Study Abroad
  • Geen Avondonderwijs
  • Geen A-la-Carte en Aanschuifonderwijs
  • Geen Honours Class

Toegangseisen

Algoritmiek, Fundamentele Informatica 1, Programmeermethoden, Programmeertechnieken

Beschrijving

The course Biological Data Sharing and Integration will give an overview of important algorithms, tools and methods for the integration of the vast amounts of available biological (research) data. We start with an overview of the diverse biological data sets and the importance of integration for the search on new knowledge and insights of biological processes. The amounts and complexity of biological data poses novel challenges for presenting and publishing research. Tools such as GALAXY and TAVERNA will be presented and used. Finally novel tools for organizing and searching the semantics of the data will be discussed.

Leerdoelen

  • Obtain knowledge on the challenges and solutions for Biological Data Sharing and Integration.
  • Obtain (practical) knowledge on important tools for biological data processing pipelines such as GALAXY and TAVERNA.
  • Be able to understand and evaluate novel solutions for Biological Data Sharing and Integration as presented in research literature.

Rooster

Het meest recente rooster is te vinden op de LIACS-website:
Roosters Informatica & Biologie

Onderwijsvorm

  • Lectures
  • Workshop
  • Assignments
  • Student presentations

Toetsing

  • Assignments
  • Workshop
  • Presentation
  • Technical survey

Literatuur

  • Scientific papers from conferences, workshops and journals.

Blackboard

blackboard

Contact

Onderwijscoordinator Riet Derogeems. Riet Derogee

Website

IBDS

Talen